Reproducibility Workshop: Git and Jupyter Notebooks

Date: March 5th, 2021 2pm-4pm HST

Location: Virtual

Presenters: Sean Cleveland - UH ITS - Cyberinfrastructure, Hawaii Data Science Institute (HI-DSI)

This FREE workshop is sponsored by the University of Hawai’i Information Technology Service Cyberinfrastructure group and Hawaii Data Science Institute (HI-DSI)

This workshop focuses specifically on introducing the git version control technologies alonw with GitHub(https://github.com), and Jupyter Notebooks (https://jupyter.org) in the context of support reproducible science. Sharing Jupyter environments with My Binder(https://mybinder.org/). We will also introduce Zenodo for dataset/source code pubication - DOI assignment

Attendees will learn about how to git tools and jupyter notebooks in a way that documents data analysis and allows other to reproduce results.

Takeaways:

By the end of this workshop attendees will be able to:

• Have a basic understanding of git version control
• Have a basic understanding of jupyter notebooks
• Able to create and manage git repositories for scientific analysis.
• Share Jupyter Notebook environments with MyBinder
• Able to publish a github repository to Zenodo.

Requirements before the Workshop:

• Partcipants should sign up for a GitHub account (https://github.com) before the workshop
• Participants should bring their laptops and plan to participate actively.
• Laptops will require a browser application for accessing the Mana Open OnDemand instance

Schedule

Firday March 5th, 2021