Introduction to Bioinformatics Genomics Data Workshop

Learning Objectives

• Summarize the learning objectives for the workshop.

In this workshop, we’re going to go through running applications against sequence data for processing, data analysis and visualization. We’ll go through

• Setting up the project

    - metadata files
    - project organization
  

• Processing genomic sequences

    - connecting to a remote computer
    - using bioinformatics tools at the command line
    - automating analyses at the command line
  

• Analyzing the processed sequence data

    - using R for analyses and visualizations
    - introduce Agave/ToGo to access data and run computation
  

We’ll use an example dataset to go through the initial portions of a generic genomics analysis.

For more information on a full genomics analysis worflow tutorial see ngscourse.org

Next: Introducing the dataset